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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs67499519 chr7:64411148 G/T INTS4L1 chr7:64601603-64694600:+ 0.71 5.22 3.18E-6 Box Plot
ACC rs675033 chr1:245193923 T/C EFCAB2 chr1:245133007-245290466:+ 0.66 5.76 4.53E-7 Box Plot
ACC rs6751927 chr2:99740175 T/C TSGA10 chr2:99613724-99771427:- 0.55 5.37 1.85E-6 Box Plot
ACC rs67542101 chr17:62984301 T/C AMZ2P1 chr17:62962668-62971694:- 0.88 5.42 1.55E-6 Box Plot
ACC rs67585971 chr6:86280051 TG/T SNHG5 chr6:86370668-86388454:- 0.67 5.97 2.11E-7 Box Plot
ACC rs67596413 chr1:213046663 T/A LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs67630279 chr20:44367912 CATAT/CAT WFDC3 chr20:44376583-44420571:- 0.84 6.07 1.47E-7 Box Plot
ACC rs676453 chr9:98759603 T/C C9orf130 chr9:98568372-98638259:- 0.57 5.35 2.02E-6 Box Plot
ACC rs67665996 chr17:62985827 A/T AMZ2P1 chr17:62962668-62971694:- 0.9 5.57 9.2E-7 Box Plot
ACC rs676842 chr1:245201294 T/C EFCAB2 chr1:245133007-245290466:+ 0.69 5.87 3.09E-7 Box Plot
ACC rs67794431 chr14:64401047 TC/T SYNE2 chr14:64319701-64693151:+ 1.03 5.3 2.41E-6 Box Plot
ACC rs678244 chr9:98759956 T/C C9orf130 chr9:98568372-98638259:- 0.57 5.35 2.02E-6 Box Plot
ACC rs67831341 chr1:63964166 A/T ITGB3BP chr1:63906441-64059392:- 0.62 6.64 1.86E-8 Box Plot
ACC rs67852668 chr7:72277630 C/A TYW1B chr7:72023729-72298777:- 1.24 8.3 4.23E-11 Box Plot
ACC rs67894524 chr6:86899606 G/C SNHG5 chr6:86370668-86388454:- 0.82 5.48 1.25E-6 Box Plot